Scripts and Commands

Decompose image stack into single images (using IMOD)

 newstack -split 1 -append mrc (mrc_input_file)  TriC_0.1_ 

to give you:

TriC_0.1_001.mrc
TriC_0.1_002.mrc
TriC_0.1_003.mrc
…
							

This command takes an image stack (your_mrc_input_file), and renames the individual slices TriC_0.1_[running_number]


More to come