Software

Documentation for Sparx

SparxWiki

These pages are for reference only, and some links may be broken. Sparx is no longer being actively developed.

This site was preserved by Pawel Penczek and Mike Strauss.

Scripts in Strauss Lab

Here are some scripts we use or have published.

Other Scripts and Commands

Decompose image stack into single images (using IMOD)

 newstack -split 1 -append mrc (mrc_input_file)  TriC_0.1_

to give you:

TriC_0.1_001.mrc
TriC_0.1_002.mrc
TriC_0.1_003.mrc
…

This command takes an image stack (your_mrc_input_file), and renames the individual slices TriC_0.1_[running_number]

More to come